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Monday Poster Session
Category: Biliary/Pancreas
Chenyu Sun, MD, MSc
AMITA Health Saint Joseph Hospital
Chicago, IL, United States
DEGS | Genes Name | ||||||
Up-regulated | KIF26B COL3A1 CXCR4 ADAM12 EPHA3 S100P SERPINB5 TMEM158 F2RL2 CEACAM6 FAM19A5 INHBA ANXA10 TCN1 COL1A1 POSTN PLXDC2 MIR6787///SLC16A3 NQO1 HS3ST1 VNN1 CEACAM5 LOC100509457///HLA-DQA2///HLA-DQA1 FNDC1 PCDH7 SLC6A6 TRIM29 TMC5 CTSE LOC100505984///ITGB6 IGLC1 GABRP CD52 GJB2 COMP F2R DUOX2 CRP C19orf33 SERPINA1 MIR8071-2///MIR8071-1///IGHV4-31///IGHM///IGHG2///IGHG1 PHLDA2 FN1 RUNX2 LOC102725271///NTM OLFML2B IFI27 KRT19 OSBPL10 NHS CTSB SULF1 KLK10 LAMC2 CXCL5 LYZ RARRES1 LOC101928269///LOC100506403///RUNX1 KYNU CCL20 SDR16C5 MATN3 SHISA2 SLPI GPRC5A MSR1 LCN2 IGFBP3 COL5A1 SFN MXRA5 COL11A1 GPX2 LOC101060835///HLA-DQB1 CTHRC1 CDH11 AHNAK2 ITGA2 S100A6 TFF1 SLC6A14 IGK///IGKC CLDN18 COL1A2 CP MMP1 S100A11 COL8A1 AGR2 STEAP1 | ||||||
| Category | Term | Count | % | p-Value | FDR | |
Up-regulated DEG | GOTERM_BP_DIRECT | extracellular matrix organization | 14 | 17.1 | 2.8E-12 | 1.6E-9 | |
|
| collagen catabolic process | 8 | 9.8 | 1.2E-8 | 3.4E-6 | |
|
| collagen fibril organization | 5 | 6.1 | 2.5E-5 | 3.5E-3 | |
| GOTERM_CC_DIRECT | extracellular region | 31 | 37.8 | 3.1E-12 | 3.4E-10 | |
|
| extracellular space | 27 | 32.9 | 6.5E-11 | 3.7E-9 | |
|
| extracellular exosome | 34 | 41.5 | 3.5E-8 | 1.3E-6 | |
| GOTERM_MF_DIRECT | extracellular matrix structural constituent | 7 | 8.5 | 3.6E-7 | 5.7E-5 | |
|
| platelet-derived growth factor binding | 4 | 4.9 | 1.1E-5 | 9.0E-4 | |
|
| calcium ion binding | 12 | 14.6 | 1.9E-4 | 9.8E-3 | |
KEGG |
| ECM-receptor interaction | 9 | 11.0 | 8.4E-9 | 5.3E-7 | |
|
| Focal adhesion | 9 | 11.0 | 6.6E-6 | 2.1E-4 | |
|
| Amoebiasis | 7 | 8.5 | 1.3E-5 | 2.8E-4 |